Long-Read Metagenomic Sequencing of a Pooled Fecal Sample from Giant Pandas (ONT & PacBio HiFi)
A pooled fecal sample from three giant pandas was sequenced using Oxford Nanopore Technologies (ONT) and PacBio HiFi platforms, and the datasets......
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Analysis of Giant Panda Gut Microbial Metagenomic Data Using Kraken2 and PBac v2 Databases
We have pre-built Kraken2 (v2.1.2) and Bracken (v2.9) reference database packages based on the PBac v2 database, which can be downloaded from this......
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Taxonomic Relative Abundance Estimation via Kraken2 and Bracken
1. MAGs Generation Workflow2. Isolated Bacterial Genome Assembly Workflow3. Taxonomic Relative Abundance Estimation via Kraken2 and Bracken4.......
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Enterotyping Analysis Pipeline
1. MAGs Generation Workflow2. Isolated Bacterial Genome Assembly Workflow3. Taxonomic Relative Abundance Estimation via Kraken2 and Bracken4.......
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Resource download for Pbac database
This database provides query and download capabilities for individual genomes. To selectively retrieve or download specific genomic data, please......
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Our previous studies —— Functions of Giant Panda's Gut Microbiota
In consideration of the unique digestive tract structure and dietary habits of giant pandas, we researched the composition and function of their......
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Giant Panda Gut Microbiome Genome Database - About Pbac database
This study establishes an advanced reference genome collection for giant panda gut microbiota through integrated culturomics and long-read......
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Isolated Bacterial Genome Assembly and Quality Assessment Pipeline
1. MAGs Generation Workflow2. Isolated Bacterial Genome Assembly Workflow3. Taxonomic Relative Abundance Estimation via Kraken2 and Bracken4.......
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MAGs Generation Workflow with Illumina short reads for Pbac version 2
1. MAGs Generation Workflow2. Isolated Bacterial Genome Assembly Workflow3. Taxonomic Relative Abundance Estimation via Kraken2 and Bracken4.......
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